Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 52 curated entries in PaperBLAST's database that match '4.2.1.6'.

These curated entries have 40 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0839: Nitrilase
is similar to:
PaperBLAST

NRL4A_TOBAC / Q42965: Bifunctional nitrilase/nitrile hydratase NIT4A; TNIT4A; 3-cyanoalanine hydratase; Cyanoalanine nitrilase A; Nitrilase 4A; EC 3.5.5.1; EC 3.5.5.4; EC 4.2.1.65 from Nicotiana tabacum

35% id,
92% cov

NRL4A_LUPAN / Q5QGZ8: Bifunctional nitrilase/nitrile hydratase NIT4A; LaNIT4A; 3-cyanoalanine hydratase; Cyanoalanine nitrilase A; EC 3.5.5.4; EC 4.2.1.65 from Lupinus angustifolius
NIT4A / Q5QGZ8: β-cyano-L-alanine nitrilase (EC 3.5.5.4; EC 4.2.1.65) from Lupinus angustifolius
Q5QGZ8: cyanoalanine nitrilase (EC 3.5.5.4); 3-Cyanoalanine hydratase (EC 4.2.1.65) from Lupinus angustifolius

35% id,
92% cov

NRL4_ARATH / P46011: Bifunctional nitrilase/nitrile hydratase NIT4; Cyanoalanine nitrilase; Nitrilase 4; EC 3.5.5.1; EC 3.5.5.4; EC 4.2.1.65 from Arabidopsis thaliana

37% id,
87% cov

More...

Synpcc7942_0930: (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase
is similar to:
PaperBLAST

fabZ: beta-hydroxyacyl-acyl carrier protein dehydratase; EC 4.2.1.60 from Toxoplasma gondii

50% id,
61% cov

Synpcc7942_1388: Carbonate dehydratase
is similar to:
PaperBLAST

CAH1_HORSE / P00917: Carbonic anhydrase 1; Carbonate dehydratase I; Carbonic anhydrase I; CA-I; Cyanamide hydratase CA1; EC 4.2.1.1; EC 4.2.1.69 from Equus caballus

31% id,
93% cov

CAH2_BOVIN / P00921: Carbonic anhydrase 2; Carbonate dehydratase II; Carbonic anhydrase II; CA-II; Cyanamide hydratase CA2; EC 4.2.1.1; EC 4.2.1.69 from Bos taurus

31% id,
89% cov

CAH2_HUMAN / P00918: Carbonic anhydrase 2; Carbonate dehydratase II; Carbonic anhydrase C; CAC; Carbonic anhydrase II; CA-II; Cyanamide hydratase CA2; EC 4.2.1.1; EC 4.2.1.69 from Homo sapiens

30% id,
89% cov

More...

Synpcc7942_2373: hypothetical protein
is similar to:
PaperBLAST

GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus

24% id,
88% cov

Synpcc7942_0626: dihydroxy-acid dehydratase
is similar to:
PaperBLAST

ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum

32% id,
63% cov

ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum

31% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory