Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 590 curated entries in PaperBLAST's database that match '4.2.3.1'.

These curated entries have 408 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2612: threonine synthase
is similar to:
PaperBLAST

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

60% id,
99% cov

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

59% id,
93% cov

THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis
P9WG59: threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis

58% id,
93% cov

More...

Synpcc7942_1184: 6-pyruvoyl-tetrahydropterin synthase-like protein
is similar to:
PaperBLAST

P27213: 6-pyruvoyltetrahydropterin synthase (EC 4.2.3.12) from Rattus norvegicus

48% id,
92% cov

PTPS_HUMAN / Q03393: 6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC 4.2.3.12 from Homo sapiens
Q03393: 6-pyruvoyltetrahydropterin synthase (EC 4.2.3.12) from Homo sapiens

49% id,
91% cov

PTPS_MOUSE / Q9R1Z7: 6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC 4.2.3.12 from Mus musculus

49% id,
89% cov

More...

Synpcc7942_1782: threonine synthase
is similar to:
PaperBLAST

THRC_METAC / Q8TQD4: Threonine synthase; TS; EC 4.2.3.1 from Methanosarcina acetivorans
GB|AAM05023.1: threonine synthase; EC 4.2.3.1 from Methanosarcina acetivorans

40% id,
98% cov

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

38% id,
97% cov

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

37% id,
98% cov

More...

Synpcc7942_0525: 3-dehydroquinate synthase
is similar to:
PaperBLAST

EVS_ACTMD / C6WFL3: 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum
Amir_2000 / C6WFL3: 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum
C6WFL3: 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum

39% id,
85% cov

EVS_STIAD / Q08VU0: 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Stigmatella aurantiaca
Q08VU0: 2-epi-valiolone synthase (EC 4.2.3.155) from Stigmatella aurantiaca

36% id,
89% cov

EEVS_STRGA / B0B0T7: 2-epi-5-epi-valiolone synthase; EEVS; EC 4.2.3.152 from Streptomyces glaucescens

34% id,
91% cov

More...

Synpcc7942_1984: phytoene synthase
is similar to:
PaperBLAST

A0LVK5: hydroxysqualene synthase (EC 4.2.3.156) from Acidothermus cellulolyticus

30% id,
80% cov

Synpcc7942_0943: acetylornithine aminotransferase
is similar to:
PaperBLAST

AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens
Q8IUZ5: 5-phosphonooxy-L-lysine phospho-lyase (EC 4.2.3.134) from Homo sapiens

27% id,
90% cov

Synpcc7942_B2623: cysteine synthase A
is similar to:
PaperBLAST

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

26% id,
85% cov

Synpcc7942_0645: glutamate-1-semialdehyde aminotransferase
is similar to:
PaperBLAST

AT2L2_HUMAN / Q8IUZ5: 5-phosphohydroxy-L-lysine phospho-lyase; Alanine--glyoxylate aminotransferase 2-like 2; EC 4.2.3.134 from Homo sapiens
Q8IUZ5: 5-phosphonooxy-L-lysine phospho-lyase (EC 4.2.3.134) from Homo sapiens

27% id,
80% cov

Synpcc7942_2362: Trans-hexaprenyltranstransferase
is similar to:
PaperBLAST

OBLA_ASPCI / A0A0U5G0B1: Ophiobolin F synthase; OS; Aspergilol biosynthesis cluster protein AuAS; EC 4.2.3.145; EC 2.5.1.29; EC 2.5.1.81 from Aspergillus calidoustus

26% id,
35% cov

OBLA_ASPCL / A1C8C3: Ophiobolin F synthase oblA; acOS; Bifunctional sesterterpene synthase oblA; Ophiobolin biosynthesis cluster protein A; EC 4.2.3.145; EC 2.5.1.29; EC 2.5.1.81 from Aspergillus clavatus
OC / A1C8C3: ophiobolin F synthase (EC 4.2.3.145; EC 2.5.1.81; EC 2.5.1.29) from Aspergillus clavatus

23% id,
36% cov

STLSS_EMEVA / A0A0P0ZEM1: Stellatatriene synthase; SS; Stellatic acid biosynthetis gene clusters protein Stl-SS; EC 2.5.1.-; EC 4.2.3.178 from Emericella variicolor

25% id,
30% cov

More...

Synpcc7942_0171: cysteine synthase A
is similar to:
PaperBLAST

THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis
P9WG59: threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis

39% id,
23% cov

Synpcc7942_1005: HAD-superfamily hydrolase subfamily IA, variant 3
is similar to:
PaperBLAST

DRTB_ASPCI / A0A0U5GNT1: Drimenol cyclase drtB; Drimane-type sesquiterpene ester biosynthesis cluster protein B; Drimenol synthase; EC 4.2.3.194 from Aspergillus calidoustus

22% id,
33% cov

Synpcc7942_0928: outer envelope membrane protein
is similar to:
PaperBLAST

MIBS_STRLS / D3KYU2: 2-methylisoborneol synthase; 2-MIB synthase; EC 4.2.3.118 from Streptomyces lasalocidi
D3KYU2: 2-methylisoborneol synthase (EC 4.2.3.118) from Streptomyces lasalocidi

30% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

509232-510368 (frame -3) on NC_007604
is similar to:
PaperBLAST

EVS_ACTMD / C6WFL3: 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum
Amir_2000 / C6WFL3: 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum
C6WFL3: 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum
Also see hits to annotated proteins above

36% id,
98% cov

934804-937023 (frame +1) on NC_007604
is similar to:
PaperBLAST

MIBS_STRLS / D3KYU2: 2-methylisoborneol synthase; 2-MIB synthase; EC 4.2.3.118 from Streptomyces lasalocidi
D3KYU2: 2-methylisoborneol synthase (EC 4.2.3.118) from Streptomyces lasalocidi
Also see hits to annotated proteins above

26% id,
37% cov

643726-643881 (frame +1) on NC_007604
is similar to:
PaperBLAST

PROS_HETIT / W4JX79: Delta(6)-protoilludene synthase HETIRDRAFT_454193; Sesquiterpene synthase HETIRDRAFT_454193; Terpene cyclase HETIRDRAFT_454193; EC 4.2.3.135 from Heterobasidion irregulare

35% id,
14% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory