Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 79 curated entries in PaperBLAST's database that match '4.2.3.5'.

These curated entries have 57 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0212: chorismate synthase
is similar to:
PaperBLAST

AROC_YEAST / P28777: Chorismate synthase; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Saccharomyces cerevisiae

58% id,
98% cov

B5AAU3: chorismate synthase (EC 4.2.3.5) from Hordeum vulgare

65% id,
82% cov

C8Z2I6: chorismate synthase (EC 4.2.3.5) from Verticillium longisporum

51% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory