Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1007: fumarate hydratase
is similar to:

Q9HTD7: aspartate ammonia-lyase (EC from Pseudomonas aeruginosa

43% id,
94% cov

Q9LCC6: aspartate ammonia-lyase (EC from Bacillus sp.

41% id,
97% cov

Q0PC50: aspartate ammonia-lyase (EC from Campylobacter jejuni

39% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory