Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1256: glutathione S-transferase
is similar to:
PaperBLAST

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

31% id,
90% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
90% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

36% id,
45% cov

More...

Synpcc7942_2139: probable glutathione S-transferase
is similar to:
PaperBLAST

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

20% id,
97% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

22% id,
85% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

22% id,
85% cov

More...

Synpcc7942_0788: glutathione S-transferase
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

40% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory