Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 186 curated entries in PaperBLAST's database that match '6.2.1.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1352: acetyl-CoA synthetase
is similar to:
PaperBLAST

ACSA_CUPNH / P31638: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Cupriavidus necator
acsA / P31638: acetyl-CoA synthetase (EC 6.2.1.1; EC 6.2.1.17) from Cupriavidus necator

57% id,
100% cov

Q2XNL6: acetate-CoA ligase (EC 6.2.1.1) from Methanothermobacter thermautotrophicus

53% id,
100% cov

Q2I0L7: acetate-CoA ligase (EC 6.2.1.1) from Methanothermobacter thermautotrophicus

53% id,
100% cov

More...

Synpcc7942_0918: long-chain-fatty-acid CoA ligase
is similar to:
PaperBLAST

ACSL1_HUMAN / P33121: Long-chain-fatty-acid--CoA ligase 1; Acyl-CoA synthetase 1; ACS1; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2; Phytanate--CoA ligase; EC 6.2.1.3; EC 6.2.1.15; EC 6.2.1.24 from Homo sapiens
ACSL1 / P33121: long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3; EC 6.2.1.15) from Homo sapiens

28% id,
91% cov

ACSL6_HUMAN / Q9UKU0: Long-chain-fatty-acid--CoA ligase 6; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 6; LACS 6; EC 6.2.1.3; EC 6.2.1.15 from Homo sapiens
ACSL6 / Q9UKU0: long-chain acyl-CoA synthetase 6 (EC 6.2.1.15) from Homo sapiens

28% id,
89% cov

ACSL6_RAT / P33124: Long-chain-fatty-acid--CoA ligase 6; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 6; LACS 6; Long-chain-fatty-acid--CoA ligase, brain isozyme; EC 6.2.1.3; EC 6.2.1.15 from Rattus norvegicus

27% id,
89% cov

More...

Synpcc7942_1021: O-succinylbenzoic acid--CoA ligase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

24% id,
73% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

27% id,
59% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

28% id,
43% cov

More...

Synpcc7942_0711: carbamoyl phosphate synthase large subunit
is similar to:
PaperBLAST

ACD1_ARCFU / O29057: Acetate--CoA ligase [ADP-forming] I; ADP-forming acetyl coenzyme A synthetase I; ACS I; EC 6.2.1.13 from Archaeoglobus fulgidus

28% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory