Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 14 curated entries in PaperBLAST's database that match '6.3.1.11' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2296: L-glutamine synthetase
is similar to:
PaperBLAST

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

31% id,
98% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

29% id,
99% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

29% id,
98% cov

More...

Synpcc7942_2156: L-glutamine synthetase
is similar to:
PaperBLAST

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

30% id,
96% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

28% id,
94% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

36% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory