Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1003: anthranilate synthase, component I
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

45% id,
98% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

44% id,
97% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

41% id,
98% cov

More...

Synpcc7942_1334: aminodeoxychorismate synthase, subunit I
is similar to:
PaperBLAST

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

33% id,
95% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

33% id,
95% cov

TRPE_YEAST / P00899: Anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Saccharomyces cerevisiae

34% id,
88% cov

More...

Synpcc7942_2188: isochorismate synthase
is similar to:
PaperBLAST

trpE: anthranilate synthase component I; EC 4.1.3.27 from Leptospira biflexa

23% id,
90% cov

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

29% id,
64% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

28% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory