Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 22 curated entries in PaperBLAST's database that match 'argininosuccinate lyase' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2475: argininosuccinate lyase
is similar to:
PaperBLAST

ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme
Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp.

77% id,
99% cov

2e9fB / Q5SLL0: Crystal structure of t.Th.Hb8 argininosuccinate lyase complexed with l-arginine

53% id,
98% cov

argH / BAC65282.1: argininosuccinate lyase from Burkholderia multivorans

52% id,
98% cov

More...

Synpcc7942_0315: adenylosuccinate lyase
is similar to:
PaperBLAST

argH / BAC65282.1: argininosuccinate lyase from Burkholderia multivorans

27% id,
80% cov

Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans

23% id,
77% cov

1tj7B / P11447: Structure determination and refinement at 2.44 a resolution of argininosuccinate lyase from e. Coli

26% id,
63% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory