Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 2 curated entries in PaperBLAST's database that match 'citramalate isomerase small subunit' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
| Synpcc7942_0428: putative alpha-isopropylmalate/homocitrate synthase family transferase is similar to: | PaperBLAST |
DVU1914: isopropylmalate/citramalate isomerase small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 51% id, 97% cov |
| Synpcc7942_1410: 2-isopropylmalate synthase is similar to: | PaperBLAST |
DVU1914: isopropylmalate/citramalate isomerase small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 27% id, 99% cov |
| Synpcc7942_2548: isopropylmalate isomerase small subunit is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 38% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory