Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 6 curated entries in PaperBLAST's database that match 'deoxy%ribonate transporter' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2032: multidrug-efflux transporter quinolene resistance protein NorA
is similar to:

BPHYT_RS04765: 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans

22% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory