Searching in Pseudomonas simiae WCS417 (WCS417)
Found 6 curated entries in PaperBLAST's database that match '1.1.1.175' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 24 relevant proteins in Pseudomonas simiae WCS417, or try another query
| PS417_11045: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 45% id, 96% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 43% id, 98% cov |
| PS417_17895: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 36% id, 94% cov |
| PS417_21145: oxidoreductase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 34% id, 97% cov |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 32% id, 94% cov |
| PS417_05265: short-chain dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 35% id, 93% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 33% id, 96% cov |
| PS417_21440: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 34% id, 94% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 33% id, 96% cov |
| PS417_12050: short-chain dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 34% id, 94% cov |
| PS417_13755: oxidoreductase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 33% id, 96% cov |
| PS417_07245: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 32% id, 97% cov |
| PS417_15030: short-chain dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 32% id, 94% cov |
| PS417_11755: diacetyl reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 32% id, 94% cov |
| PS417_13775: dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 31% id, 93% cov |
| PS417_19575: 2,4-dienoyl-CoA reductase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 30% id, 95% cov |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 27% id, 93% cov |
| PS417_05270: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 30% id, 94% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 29% id, 91% cov |
| PS417_09065: short-chain dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 31% id, 94% cov |
| PS417_14355: sugar dehydrogenase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 31% id, 91% cov |
| PS417_09690: sugar dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 30% id, 94% cov |
| PS417_03140: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 30% id, 93% cov |
| PS417_17890: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 29% id, 92% cov |
| PS417_04775: short-chain dehydrogenase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 30% id, 86% cov |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 35% id, 71% cov |
| PS417_21925: short-chain dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 28% id, 92% cov |
| PS417_15185: 3-ketoacyl-ACP reductase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 34% id, 71% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 30% id, 73% cov |
| PS417_09500: glucose 1-dehydrogenase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 24% id, 91% cov |
| PS417_17405: AraC family transcriptional regulator is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 30% id, 71% cov |
| PS417_19255: short-chain dehydrogenase is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 23% id, 90% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 21 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3904336-3905256 (frame +1) on CP007637 is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 29% id, 99% cov |
| 1058539-1059573 (frame -1) on CP007637 is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 34% id, 77% cov |
Lawrence Berkeley National Laboratory