Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 44 curated entries in PaperBLAST's database that match '1.1.1.44' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_12445: 6-phosphogluconate dehydrogenase
is similar to:
PaperBLAST

Q2RIZ2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica

44% id,
100% cov

A0A1J5NX54: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica

42% id,
100% cov

6PGD2_ARATH / Q9FWA3: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Arabidopsis thaliana
Q9FWA3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana

35% id,
65% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory