Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_12695: mannitol dehydrogenase
is similar to:
PaperBLAST

O08355: mannitol 2-dehydrogenase (EC 1.1.1.67) from Pseudomonas fluorescens

95% id,
100% cov

M2DH_ASPFU / Q4WQY4: Mannitol 2-dehydrogenase; M2DH; MDH; EC 1.1.1.67 from Aspergillus fumigatus
Q4WQY4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Aspergillus fumigatus

45% id,
98% cov

DSF1_YEAST / P0CX08: Mannitol dehydrogenase DSF1; Deletion suppressor of MPT5 mutation protein 1; EC 1.1.1.67 from Saccharomyces cerevisiae
MAN2_YEAST / P0CX09: Mannitol dehydrogenase 2; EC 1.1.1.67 from Saccharomyces cerevisiae

42% id,
98% cov

More...

PS417_09690: sugar dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

35% id,
94% cov

PS417_05265: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

34% id,
94% cov

PS417_21440: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

33% id,
93% cov

PS417_09065: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
94% cov

PS417_12050: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
95% cov

PS417_17895: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
95% cov

PS417_23435: serine/threonine protein kinase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
93% cov

PS417_15030: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
95% cov

PS417_12765: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
91% cov

PS417_13755: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
93% cov

PS417_17720: iditol 2-dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

27% id,
98% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

27% id,
98% cov

PS417_18270: alcohol dehydrogenase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

27% id,
95% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

25% id,
93% cov

PS417_12045: iditol 2-dehydrogenase
is similar to:
PaperBLAST

Q9WYD4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Thermotoga maritima

27% id,
95% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

24% id,
91% cov

PS417_21145: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
94% cov

PS417_14355: sugar dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
91% cov

PS417_17710: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

26% id,
92% cov

PS417_03140: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

26% id,
92% cov

PS417_13380: alcohol dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

25% id,
82% cov

PS417_26165: aldehyde dismutase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

26% id,
69% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

25% id,
70% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

27% id,
51% cov

PS417_19060: NADPH:quinone oxidoreductase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

30% id,
35% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

29% id,
35% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

29% id,
35% cov

PS417_00115: quinone oxidoreductase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

36% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

5076675-5077640 (frame -2) on CP007637
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

30% id,
98% cov

3285586-3286359 (frame +1) on CP007637
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

30% id,
97% cov

3021315-3022106 (frame -2) on CP007637
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

28% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory