Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 36 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_17720: iditol 2-dehydrogenase
is similar to:
PaperBLAST

PS417_17720: xylitol 2-dehydrogenase (EC 1.1.1.9) from Pseudomonas simiae

100% id,
100% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans

78% id,
96% cov

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

50% id,
98% cov

More...

PS417_12045: iditol 2-dehydrogenase
is similar to:
PaperBLAST

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

53% id,
100% cov

PS417_17720: xylitol 2-dehydrogenase (EC 1.1.1.9) from Pseudomonas simiae

53% id,
98% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans

52% id,
97% cov

More...

PS417_09065: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

35% id,
100% cov

PS417_11520: sorbitol dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

35% id,
99% cov

PS417_11755: diacetyl reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

35% id,
98% cov

PS417_15850: alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

33% id,
97% cov

DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana

31% id,
93% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

28% id,
99% cov

More...

PS417_18525: oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

33% id,
98% cov

PS417_13755: oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
99% cov

PS417_12050: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

PS417_21145: oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
100% cov

PS417_13775: dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
100% cov

PS417_19575: 2,4-dienoyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
98% cov

PS417_12765: oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
97% cov

PS417_18270: alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
97% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

29% id,
92% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

28% id,
94% cov

More...

PS417_12150: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
98% cov

PS417_21340: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
100% cov

PS417_05265: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
97% cov

PS417_06330: S-(hydroxymethyl)glutathione dehydrogenase
is similar to:
PaperBLAST

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

30% id,
95% cov

XYL2_YEAST / Q07993: D-xylulose reductase; Xylitol dehydrogenase; XDH; EC 1.1.1.9 from Saccharomyces cerevisiae
Q07993: D-xylulose reductase (EC 1.1.1.9) from Saccharomyces cerevisiae

28% id,
98% cov

DHSO1_YEAST / P35497: Sorbitol dehydrogenase 1; SDH 1; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.9 from Saccharomyces cerevisiae

28% id,
98% cov

More...

PS417_15030: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
100% cov

PS417_17890: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
97% cov

PS417_11045: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

26% id,
98% cov

PS417_17710: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

27% id,
96% cov

PS417_27340: NADPH:quinone oxidoreductase
is similar to:
PaperBLAST

Dshi_0551: D-xylulose reductase (EC 1.1.1.9) from Dinoroseobacter shibae

27% id,
94% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

26% id,
93% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

26% id,
83% cov

PS417_13860: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

36% id,
71% cov

PS417_13380: alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

27% id,
92% cov

PS417_23435: serine/threonine protein kinase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
71% cov

PS417_26165: aldehyde dismutase
is similar to:
PaperBLAST

DHSO1_YEAST / P35497: Sorbitol dehydrogenase 1; SDH 1; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.9 from Saccharomyces cerevisiae

33% id,
71% cov

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

28% id,
82% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

33% id,
69% cov

More...

PS417_05270: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

35% id,
68% cov

PS417_07245: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

24% id,
99% cov

PS417_25680: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

27% id,
81% cov

PS417_04775: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
76% cov

PS417_08090: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
70% cov

PS417_19255: short-chain dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
69% cov

PS417_00115: quinone oxidoreductase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

29% id,
69% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

35% id,
23% cov

PS417_19060: NADPH:quinone oxidoreductase
is similar to:
PaperBLAST

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

26% id,
63% cov

PS417_10340: alcohol dehydrogenase
is similar to:
PaperBLAST

A0A3S7PMB5: D-xylulose reductase (EC 1.1.1.9) from Pichia kudriavzevii

27% id,
46% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

33% id,
22% cov

ladA / A2QAC0: L-arabinitol 4-dehydrogenase (EC 1.1.1.9; EC 1.1.1.12) from Aspergillus niger

38% id,
16% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 34 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2209754-2210863 (frame +2) on CP007637
is similar to:
PaperBLAST

A0A3S7PMB5: D-xylulose reductase (EC 1.1.1.9) from Pichia kudriavzevii
Also see hits to annotated proteins above

27% id,
54% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory