Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 15 curated entries in PaperBLAST's database that match '1.1.2.8' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_17460: quinonprotein alcohol dehydrogenase
is similar to:
PaperBLAST

Q88JH5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

94% id,
98% cov

B1N7J0: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

94% id,
98% cov

QEDH_PSEPU / A8R3S4: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein alcohol dehydrogenase ADH I; ADH I; EC 1.1.2.8 from Pseudomonas putida

90% id,
97% cov

More...

PS417_17435: dehydrogenase
is similar to:
PaperBLAST

B1N7J5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

92% id,
99% cov

QEDH_PSEPU / A8R3S4: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein alcohol dehydrogenase ADH I; ADH I; EC 1.1.2.8 from Pseudomonas putida

53% id,
98% cov

QEDH_PSEAE / Q9Z4J7: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); EC 1.1.2.8 from Pseudomonas aeruginosa
exaA / Q9Z4J7: alcohol dehydrogenase (cytochrome c550) monomer (EC 1.1.2.8) from Pseudomonas aeruginosa
Q9Z4J7: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas aeruginosa

53% id,
96% cov

More...

PS417_00270: alcohol dehydrogenase
is similar to:
PaperBLAST

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

54% id,
88% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

54% id,
88% cov

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

54% id,
88% cov

PS417_10880: alcohol dehydrogenase
is similar to:
PaperBLAST

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

46% id,
88% cov

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

46% id,
88% cov

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

46% id,
88% cov

PS417_13035: aldehyde dehydrogenase
is similar to:
PaperBLAST

C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

36% id,
81% cov

D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

36% id,
81% cov

C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus

36% id,
81% cov

PS417_05300: glucose dehydrogenase
is similar to:
PaperBLAST

QEDH_PSEPU / A8R3S4: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein alcohol dehydrogenase ADH I; ADH I; EC 1.1.2.8 from Pseudomonas putida

28% id,
38% cov

B1N7J0: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

28% id,
38% cov

Q88JH5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

27% id,
38% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory