Curated BLAST
Searching in Pseudomonas simiae WCS417 (WCS417)
Found 7 curated entries in PaperBLAST's database that match '1.1.3.2' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_15625: lactate dehydrogenase is similar to: | PaperBLAST |
Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. | 41% id, 96% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 37% id, 94% cov |
lctO / D4YFM2: lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans D4YFM2: L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 32% id, 92% cov |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 32% id, 92% cov |
A9QH69: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 40% id, 40% cov |
O33655: L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 39% id, 39% cov |
A9QH69: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 31% id, 48% cov |
O33655: L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 32% id, 46% cov |
More... |
PS417_19130: lactate dehydrogenase is similar to: | PaperBLAST |
Q8Z0C8: L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. | 39% id, 96% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 35% id, 91% cov |
A9QH69: (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 30% id, 87% cov |
O33655: L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae | 30% id, 84% cov |
lctO / D4YFM2: lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans D4YFM2: L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 26% id, 91% cov |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 26% id, 91% cov |
F8WQN2: L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii | 46% id, 41% cov |
lctO / D4YFM2: lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans D4YFM2: L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 37% id, 48% cov |
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans | 37% id, 48% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory