Searching in Pseudomonas simiae WCS417 (WCS417)
Found 6 curated entries in PaperBLAST's database that match '1.1.99.2' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_26560: amino acid dehydrogenase is similar to: | PaperBLAST |
L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens | 33% id, 23% cov |
L2HDH_ARATH / Q9LES4: L-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.2 from Arabidopsis thaliana | 30% id, 20% cov |
PS417_05915: spermidine dehydrogenase is similar to: | PaperBLAST |
L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens | 28% id, 24% cov |
L2HDH_INDAL / S2DJ52: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Indibacter alkaliphilus | 23% id, 16% cov |
PS417_14320: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis | 40% id, 9% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
3901658-3903127 (frame +2) on CP007637 is similar to: | PaperBLAST |
L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis | 26% id, 53% cov |
5975763-5977148 (frame -2) on CP007637 is similar to: | PaperBLAST |
L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis | 27% id, 45% cov |
5743637-5744872 (frame -3) on CP007637 is similar to: | PaperBLAST |
L2HDH_ACHAE / A0A0M7LBC1: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Achromobacter aegrifaciens | 32% id, 25% cov |
Lawrence Berkeley National Laboratory