Searching in Pseudomonas simiae WCS417 (WCS417)
Found 19 curated entries in PaperBLAST's database that match '1.1.99.6'.
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_27035: FAD-linked oxidase is similar to: | PaperBLAST |
DLD_ANAHA / D4MUV9: D-lactate dehydrogenase; EC 1.1.99.6 from Anaerostipes hadrus | 33% id, 97% cov |
DLD_ARCFU / O29853: D-lactate dehydrogenase; EC 1.1.99.6 from Archaeoglobus fulgidus | 30% id, 98% cov |
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix | 29% id, 99% cov |
PS417_24110: 4Fe-4S ferredoxin is similar to: | PaperBLAST |
DLD_ANAHA / D4MUV9: D-lactate dehydrogenase; EC 1.1.99.6 from Anaerostipes hadrus | 24% id, 85% cov |
SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti | 31% id, 44% cov |
Psest_3841: D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) from Pseudomonas stutzeri | 34% id, 37% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
5219766-5222621 (frame +3) on CP007637 is similar to: | PaperBLAST |
SMc00832: D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) from Sinorhizobium meliloti | 30% id, 48% cov |
Lawrence Berkeley National Laboratory