Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 30 curated entries in PaperBLAST's database that match '1.13.11.11' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_23705: tryptophan 2,3-dioxygenase
is similar to:
PaperBLAST

PS417_23705: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas simiae

100% id,
100% cov

AO353_05970: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens

89% id,
100% cov

PfGW456L13_4292: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens

89% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory