Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 20 curated entries in PaperBLAST's database that match '1.13.11.5' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_05015: homogentisate 1,2-dioxygenase
is similar to:
PaperBLAST

AO353_15550: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

91% id,
98% cov

PfGW456L13_4962: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

89% id,
98% cov

Pf6N2E2_5290: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens

88% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory