Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_27270: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
is similar to:
PaperBLAST

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

26% id,
73% cov

Q9MZS9: kynurenine 3-monooxygenase (EC 1.14.13.9) from Sus scrofa

25% id,
37% cov

KMO_YEAST / P38169: Kynurenine 3-monooxygenase; Biosynthesis of nicotinic acid protein 4; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Saccharomyces cerevisiae
P38169: kynurenine 3-monooxygenase (EC 1.14.13.9) from Saccharomyces cerevisiae

31% id,
19% cov

More...

PS417_09915: hypothetical protein
is similar to:
PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

24% id,
32% cov

PS417_13015: 6-hydroxynicotinate 3-monooxygenase
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

34% id,
23% cov

PS417_14715: 2-polyprenyl-6-methoxyphenol hydroxylase
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

32% id,
17% cov

sibC / C0LTL7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Streptosporangium sibiricum

55% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory