Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 23 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_18580: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS_PSEAE / Q51344: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Pseudomonas aeruginosa

90% id,
100% cov

DHAS1_VIBCH / Q9KQG2: Aspartate-semialdehyde dehydrogenase 1; ASA dehydrogenase 1; ASADH 1; Aspartate-beta-semialdehyde dehydrogenase 1; EC 1.2.1.11 from Vibrio cholerae
asd / Q9KQG2: aspartate-β-semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Vibrio cholerae
Q9KQG2: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Vibrio cholerae

71% id,
99% cov

DHAS_ECOLI / P0A9Q9: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Escherichia coli
Dap / b3433: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli
asd / P0A9Q9: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli
P0A9Q9: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli

70% id,
100% cov

More...

PS417_18575: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

40% id,
99% cov

DHAS_MYCTU / P9WNX5: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Mycobacterium tuberculosis
P9WNX5: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Mycobacterium tuberculosis

36% id,
99% cov

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

35% id,
99% cov

More...

PS417_25660: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC 1.2.1.11) from Methanocaldococcus jannaschii

25% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory