Searching in Pseudomonas simiae WCS417 (WCS417)
Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.
These curated entries have 87 distinct sequences.
Running ublast with E ≤ 0.01
Found 18 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_15075: NAD-glutamate dehydrogenase is similar to: | PaperBLAST |
DHE2_PSEAE / Q9HZE0: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Pseudomonas aeruginosa | 83% id, 100% cov |
Psest_1944: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form from Pseudomonas stutzeri | 72% id, 100% cov |
DHE2_HALED / E1V4J5: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Halomonas elongata | 52% id, 100% cov |
PS417_10915: ornithine cyclodeaminase is similar to: | PaperBLAST |
DAUB_PSEAE / Q9HXE4: NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa | 70% id, 98% cov |
PS417_22360: glycine dehydrogenase is similar to: | PaperBLAST |
P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli | 60% id, 99% cov |
Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana | 57% id, 92% cov |
P26969: glycine cleavage system (subunit 3/4) (EC 1.4.1.27) from Pisum sativum | 57% id, 91% cov |
PS417_27250: glycine cleavage system protein H is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 60% id, 99% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 50% id, 93% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 53% id, 71% cov |
PS417_24260: glutamate dehydrogenase is similar to: | PaperBLAST |
Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum | 59% id, 99% cov |
DHE2_CLOSY / P24295: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Clostridium symbiosum | 55% id, 100% cov |
P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima | 33% id, 99% cov |
PS417_27255: glycine cleavage system protein T is similar to: | PaperBLAST |
P27248: glycine cleavage system (subunit 3/3) (EC 1.4.1.27) from Escherichia coli | 56% id, 100% cov |
Q5NHP0: glycine cleavage system (EC 1.4.1.27) from Francisella tularensis | 50% id, 99% cov |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 40% id, 98% cov |
PS417_22355: glycine cleavage system protein H is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 51% id, 95% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 49% id, 72% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 38% id, 88% cov |
PS417_08905: dihydrolipoamide dehydrogenase is similar to: | PaperBLAST |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 50% id, 91% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 49% id, 91% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 48% id, 91% cov |
PS417_22370: glycine cleavage system protein T is similar to: | PaperBLAST |
P28337: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Gallus gallus | 47% id, 95% cov |
P48728: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Homo sapiens | 46% id, 92% cov |
P49364: glycine cleavage system (subunit 1/4) (EC 1.4.1.27) from Pisum sativum | 45% id, 92% cov |
PS417_05040: amino acid dehydrogenase is similar to: | PaperBLAST |
VDH_STRCO / Q06539: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces coelicolor | 42% id, 95% cov |
VDH_STRA4 / O69056: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces albus | 42% id, 95% cov |
DHPH_RHOSO / Q59771: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Rhodococcus sp. | 38% id, 92% cov |
PS417_17560: dihydrolipoamide dehydrogenase is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 39% id, 96% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 40% id, 91% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 39% id, 92% cov |
PS417_07650: pyridine nucleotide-disulfide oxidoreductase is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 31% id, 96% cov |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 29% id, 99% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 31% id, 90% cov |
PS417_14060: glutathione reductase is similar to: | PaperBLAST |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 31% id, 97% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 31% id, 94% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 30% id, 89% cov |
PS417_26180: sarcosine oxidase subunit alpha is similar to: | PaperBLAST |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 27% id, 98% cov |
PS417_17585: ornithine cyclodeaminase is similar to: | PaperBLAST |
DAUB_PSEAE / Q9HXE4: NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa | 26% id, 70% cov |
PS417_14040: alkyl hydroperoxide reductase is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 27% id, 64% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 27% id, 63% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 28% id, 29% cov |
PS417_26240: N-methylproline demethylase is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 22% id, 69% cov |
PS417_11105: pyridine nucleotide-disulfide oxidoreductase is similar to: | PaperBLAST |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 27% id, 43% cov |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 26% id, 41% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 18 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4847904-4849064 (frame +3) on CP007637 is similar to: | PaperBLAST |
P28337: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Gallus gallus | 46% id, 97% cov |
P48728: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Homo sapiens | 45% id, 97% cov |
A0A122IGX3: glycine cleavage system (EC 1.4.1.27) from Plasmodium berghei | 29% id, 95% cov |
Lawrence Berkeley National Laboratory