Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 30 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_26730: pyrroline-5-carboxylate reductase
is similar to:

P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC from Pseudomonas aeruginosa

71% id,
100% cov

PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC from Hordeum vulgare

41% id,
96% cov

Shew_1136: pyrroline-5-carboxylate reductase (EC from Shewanella loihica

39% id,
100% cov


PS417_14595: pyrroline-5-carboxylate reductase
is similar to:

BT3757: pyrroline-5-carboxylate reductase (EC from Bacteroides thetaiotaomicron

22% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory