Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 61 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_17560: dihydrolipoamide dehydrogenase
is similar to:		 PaperBLAST

PS417_17560: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas simiae

 100% id,
100% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

 90% id,
100% cov

AO356_22975: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

 90% id,
100% cov

More...

PS417_08905: dihydrolipoamide dehydrogenase
is similar to:		 PaperBLAST

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

 90% id,
100% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

 82% id,
100% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 82% id,
100% cov

More...

PS417_14060: glutathione reductase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 51% id,
89% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

 36% id,
95% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

 35% id,
95% cov

More...

PS417_07650: pyridine nucleotide-disulfide oxidoreductase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 45% id,
89% cov

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

 33% id,
96% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

 31% id,
97% cov

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PS417_26180: sarcosine oxidase subunit alpha
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 38% id,
75% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 40% id,
11% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 39% id,
11% cov

More...

PS417_14730: nitrite reductase
is similar to:		 PaperBLAST

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 25% id,
97% cov

DLDH1_PSEPU / P09063: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of branched-chain alpha-keto acid dehydrogenase complex; LPD-Val; EC 1.8.1.4 from Pseudomonas putida

 24% id,
92% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

 23% id,
96% cov

More...

PS417_11105: pyridine nucleotide-disulfide oxidoreductase
is similar to:		 PaperBLAST

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

 25% id,
96% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

 26% id,
82% cov

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 32% id,
52% cov

More...

PS417_02215: dihydrolipoamide acetyltransferase
is similar to:		 PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 30% id,
69% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 33% id,
61% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 54% id,
20% cov

More...

PS417_14040: alkyl hydroperoxide reductase
is similar to:		 PaperBLAST

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

 28% id,
66% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

 25% id,
72% cov

DLDH_PEA / P31023: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; Pyruvate dehydrogenase complex E3 subunit; E3; PDC-E3; EC 1.8.1.4 from Pisum sativum

 27% id,
64% cov

More...

PS417_23515: thioredoxin reductase
is similar to:		 PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

 26% id,
68% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 21% id,
57% cov

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

 52% id,
7% cov

More...

PS417_26240: N-methylproline demethylase
is similar to:		 PaperBLAST

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 22% id,
69% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

 21% id,
57% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 28% id,
34% cov

More...

PS417_03855: NADH dehydrogenase
is similar to:		 PaperBLAST

DLDH_MYCTU / P9WHH9: Dihydrolipoyl dehydrogenase; LPD; Component of peroxynitrite reductase/peroxidase complex; Component of PNR/P; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Mycobacterium tuberculosis
P9WHH8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis
P9WHH9: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis

 26% id,
33% cov

PS417_11775: acetoin dehydrogenase
is similar to:		 PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 32% id,
27% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 34% id,
22% cov

PS417_08900: dihydrolipoamide succinyltransferase
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 33% id,
22% cov

PS417_17165: 2,4-dienoyl-CoA reductase
is similar to:		 PaperBLAST

A4V929: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Acidianus ambivalens

 26% id,
24% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

 20% id,
23% cov

PS417_19680: chemotaxis protein CheA
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 46% id,
8% cov

PS417_02970: acetyl-CoA carboxylase
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 37% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3083507-3085156 (frame -3) on CP007637
is similar to:		 PaperBLAST

O81413: leghemoglobin reductase (EC 1.6.2.6); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Glycine max
Also see hits to annotated proteins above

 27% id,
69% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory