Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 29 curated entries in PaperBLAST's database that match '2.1.1.14' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_18775: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
is similar to:
PaperBLAST

MetE / b3829: cobalamin-independent homocysteine transmethylase (EC 2.1.1.14) from Escherichia coli
metE: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC 2.1.1.14 from Escherichia coli
metE / P25665: cobalamin-independent homocysteine transmethylase (EC 2.1.1.14) from Escherichia coli
P25665: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Escherichia coli

26% id,
43% cov

metE / Q8NRB3: cobalamin-independent methionine synthase (EC 2.1.1.14) from Corynebacterium glutamicum

23% id,
44% cov

A0A1B2JIW1: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14) from Komagataella pastoris

24% id,
43% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory