Curated BLAST
Searching in Pseudomonas simiae WCS417 (WCS417)
Found 13 curated entries in PaperBLAST's database that match '2.1.2.10' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_22370: glycine cleavage system protein T
is similar to: | PaperBLAST |
PS417_22370: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas simiae | 100% id,
100% cov |
PfGW456L13_1866: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens | 91% id,
100% cov |
Pf6N2E2_5556: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens | 88% id,
100% cov |
GCST_CHICK / P28337: Aminomethyltransferase, mitochondrial; Glycine cleavage system T protein; GCVT; EC 2.1.2.10 from Gallus gallus
AMT / P28337: aminomethyltransferase (EC 2.1.2.10) from Gallus gallus | 47% id,
95% cov |
GCST_HUMAN / P48728: Aminomethyltransferase, mitochondrial; Glycine cleavage system T protein; GCVT; EC 2.1.2.10 from Homo sapiens
AMT / P48728: aminomethyltransferase (EC 2.1.2.10) from Homo sapiens | 46% id,
92% cov |
GCST_YEAST / P48015: Aminomethyltransferase, mitochondrial; Glycine cleavage system T protein; GCVT; Glycine decarboxylase complex subunit T; EC 2.1.2.10 from Saccharomyces cerevisiae | 40% id,
97% cov |
BWI76_RS23880: Aminomethyltransferase (EC 2.1.2.10) from Klebsiella michiganensis | 34% id,
97% cov |
GCST_ECOLI / P27248: Aminomethyltransferase; Glycine cleavage system T protein; EC 2.1.2.10 from Escherichia coli
GcvT / b2905: aminomethyltransferase (EC 2.1.2.10) from Escherichia coli
gcvT: aminomethyltransferase; EC 2.1.2.10 from Escherichia coli
gcvT / P27248: aminomethyltransferase (EC 2.1.2.10) from Escherichia coli | 34% id,
97% cov |
More... |
PS417_27255: glycine cleavage system protein T
is similar to: | PaperBLAST |
GCST_ECOLI / P27248: Aminomethyltransferase; Glycine cleavage system T protein; EC 2.1.2.10 from Escherichia coli
GcvT / b2905: aminomethyltransferase (EC 2.1.2.10) from Escherichia coli
gcvT: aminomethyltransferase; EC 2.1.2.10 from Escherichia coli
gcvT / P27248: aminomethyltransferase (EC 2.1.2.10) from Escherichia coli | 56% id,
100% cov |
BWI76_RS23880: Aminomethyltransferase (EC 2.1.2.10) from Klebsiella michiganensis | 55% id,
100% cov |
PfGW456L13_1866: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens | 38% id,
96% cov |
Pf6N2E2_5556: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas fluorescens | 38% id,
96% cov |
PS417_22370: Aminomethyltransferase (EC 2.1.2.10) from Pseudomonas simiae | 37% id,
96% cov |
GCST_YEAST / P48015: Aminomethyltransferase, mitochondrial; Glycine cleavage system T protein; GCVT; Glycine decarboxylase complex subunit T; EC 2.1.2.10 from Saccharomyces cerevisiae | 34% id,
94% cov |
GCST_CHICK / P28337: Aminomethyltransferase, mitochondrial; Glycine cleavage system T protein; GCVT; EC 2.1.2.10 from Gallus gallus
AMT / P28337: aminomethyltransferase (EC 2.1.2.10) from Gallus gallus | 33% id,
92% cov |
GCST_HUMAN / P48728: Aminomethyltransferase, mitochondrial; Glycine cleavage system T protein; GCVT; EC 2.1.2.10 from Homo sapiens
AMT / P48728: aminomethyltransferase (EC 2.1.2.10) from Homo sapiens | 34% id,
90% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory