Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 37 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_05575: glycerol kinase is similar to:	PaperBLAST
PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae	100% id, 100% cov
GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli	74% id, 100% cov
A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae	73% id, 100% cov
GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus	61% id, 98% cov
GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus	61% id, 98% cov
GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis	57% id, 99% cov
GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus	56% id, 98% cov
GLPK_THEKO / O93623: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermococcus kodakarensis O93623: glycerol kinase (EC 2.7.1.30) from Thermococcus kodakarensis	56% id, 98% cov
D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.	54% id, 98% cov
GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii	53% id, 100% cov
SM_b21009: Glycerol kinase (EC 2.7.1.30) from Sinorhizobium meliloti	53% id, 99% cov
P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis	51% id, 97% cov
Dshi_3420: Glycerol kinase (EC 2.7.1.30) from Dinoroseobacter shibae	52% id, 95% cov
GLPK_ARATH / Q9M8L4: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; Protein GLYCEROL INSENSITIVE 1; Protein NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1; EC 2.7.1.30 from Arabidopsis thaliana	49% id, 98% cov
GLPK_TRYBB / Q9NJP9: Glycerol kinase, glycosomal; GK; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Trypanosoma brucei Q9NJP9: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM4: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM3: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei	46% id, 99% cov
P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.	48% id, 94% cov
GLPK_MOUSE / Q64516: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Mus musculus	49% id, 92% cov
GLPK_RAT / Q63060: Glycerol kinase; Glycerokinase; ATP-stimulated glucocorticoid-receptor translocation promoter; ASTP; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Rattus norvegicus	49% id, 92% cov
GLPK_HUMAN / P32189: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Homo sapiens	49% id, 92% cov
B0I530: glycerol kinase (EC 2.7.1.30) from Trypanosoma vivax	45% id, 99% cov
Q0IID9: glycerol kinase (EC 2.7.1.30) from Bos taurus	49% id, 92% cov
Q75T26: glycerol kinase (EC 2.7.1.30) from Trypanosoma congolense	45% id, 99% cov
GLPK2_HUMAN / Q14410: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Homo sapiens	48% id, 92% cov
GLPK2_MOUSE / Q9WU65: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Mus musculus Q9WU65: glycerol kinase (EC 2.7.1.30) from Mus musculus	48% id, 92% cov
B0M0V1: glycerol kinase (EC 2.7.1.30) from Bombyx mori	43% id, 98% cov
B0I1G6: glycerol kinase (EC 2.7.1.30) from Bombyx mori	42% id, 92% cov
B0Y6Y4: glycerol kinase (EC 2.7.1.30) from Aspergillus fumigatus	42% id, 92% cov
GLPK5_MOUSE / Q8BX05: Glycerol kinase 5; GK 5; Glycerokinase 5; ATP:glycerol 3-phosphotransferase 5; EC 2.7.1.30 from Mus musculus	34% id, 95% cov
Q6ZS86: glycerol kinase (EC 2.7.1.30) from Homo sapiens	34% id, 96% cov
More...

PS417_17715: actin is similar to:	PaperBLAST
P74260: glycerol kinase (EC 2.7.1.30) from Synechocystis sp.	29% id, 93% cov
Q75T26: glycerol kinase (EC 2.7.1.30) from Trypanosoma congolense	27% id, 96% cov
A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae	27% id, 94% cov
B0I530: glycerol kinase (EC 2.7.1.30) from Trypanosoma vivax	27% id, 94% cov
SM_b21009: Glycerol kinase (EC 2.7.1.30) from Sinorhizobium meliloti	27% id, 96% cov
GLPK_TRYBB / Q9NJP9: Glycerol kinase, glycosomal; GK; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Trypanosoma brucei Q9NJP9: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM4: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei D3KVM3: glycerol kinase (EC 2.7.1.30) from Trypanosoma brucei	27% id, 94% cov
GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli	26% id, 94% cov
GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus	25% id, 96% cov
GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus	25% id, 96% cov
Dshi_3420: Glycerol kinase (EC 2.7.1.30) from Dinoroseobacter shibae	25% id, 95% cov
GLPK_ENTFA / O34154: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis	25% id, 93% cov
D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.	24% id, 97% cov
GLPK_HALVD / D4GYI5: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; EC 2.7.1.30 from Haloferax volcanii	24% id, 95% cov
GLPK_ENTCA / O34153: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus	26% id, 90% cov
GLPK_ARATH / Q9M8L4: Glycerol kinase; Glycerokinase; ATP:glycerol 3-phosphotransferase; Protein GLYCEROL INSENSITIVE 1; Protein NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1; EC 2.7.1.30 from Arabidopsis thaliana	24% id, 95% cov
PS417_05575: Glycerol kinase (EC 2.7.1.30) from Pseudomonas simiae	24% id, 96% cov
P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis	24% id, 92% cov
More...

PS417_12690: xylulose kinase is similar to:	PaperBLAST
B0M0V1: glycerol kinase (EC 2.7.1.30) from Bombyx mori	23% id, 89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory