Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 207 curated entries in PaperBLAST's database that match '2.7.1.4'.

These curated entries have 161 distinct sequences.

Running ublast with E ≤ 0.01

Found 23 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_12685: fructokinase
is similar to:
PaperBLAST

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

79% id,
99% cov

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

79% id,
99% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

35% id,
99% cov

More...

PS417_22620: pyruvate kinase
is similar to:
PaperBLAST

KPYK2_SALTY / Q8ZNW0: Pyruvate kinase II; PK-2; EC 2.7.1.40 from Salmonella typhimurium

57% id,
99% cov

PykA / b1854: pyruvate kinase II (EC 2.7.1.40) from Escherichia coli
pykA / P21599: pyruvate kinase 2 (EC 2.7.1.40) from Escherichia coli

57% id,
99% cov

A0A0H3JER5: pyruvate kinase (EC 2.7.1.40) from Escherichia coli

57% id,
99% cov

More...

PS417_12130: ketodeoxygluconokinase
is similar to:
PaperBLAST

KDGK_ECOLI / P37647: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli

53% id,
98% cov

KDGK_ECOLW / E0J5J4: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli

53% id,
98% cov

KDGK_DICD3 / P45416: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Dickeya dadantii

53% id,
97% cov

More...

PS417_12565: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

54% id,
94% cov

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

52% id,
99% cov

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

34% id,
95% cov

More...

PS417_22625: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

46% id,
96% cov

PS417_08790: pyruvate kinase
is similar to:
PaperBLAST

KPYK_MYCTU / P9WKE5: Pyruvate kinase; PK; EC 2.7.1.40 from Mycobacterium tuberculosis
P9WKE5: pyruvate kinase (EC 2.7.1.40) from Mycobacterium tuberculosis

41% id,
99% cov

Q46078: pyruvate kinase (EC 2.7.1.40) from Corynebacterium glutamicum

40% id,
98% cov

KPYK_THEMA / Q9WY51: Pyruvate kinase; PK; EC 2.7.1.40 from Thermotoga maritima

39% id,
99% cov

More...

PS417_24600: hydrogenase
is similar to:
PaperBLAST

Q5SKG3: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Thermus thermophilus

37% id,
98% cov

THID_MYCTU / P9WG77: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Mycobacterium tuberculosis

37% id,
92% cov

THID_ECOLI / P76422: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Escherichia coli
ThiJ / b2103: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
thiD / P76422: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
P76422: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Escherichia coli

35% id,
94% cov

More...

PS417_10680: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

37% id,
97% cov

PS417_11850: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

30% id,
100% cov

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

27% id,
100% cov

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

28% id,
94% cov

More...

PS417_18385: ribokinase
is similar to:
PaperBLAST

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

30% id,
99% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

28% id,
99% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

27% id,
98% cov

More...

PS417_21365: sugar kinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

29% id,
94% cov

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

26% id,
94% cov

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

28% id,
85% cov

More...

PS417_13845: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

PS417_12690: xylulose kinase
is similar to:
PaperBLAST

PSK_SYNE7 / Q31KC7: D-ribulose kinase; D-ribulokinase; Probable sugar kinase; SePSK; EC 2.7.1.47 from Synechococcus elongatus

26% id,
98% cov

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens
Q96C11: D-ribulokinase (EC 2.7.1.47) from Homo sapiens

28% id,
30% cov

PS417_28265: pyridoxamine kinase
is similar to:
PaperBLAST

Q5SKG3: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Thermus thermophilus

30% id,
84% cov

PdxL / b2418: pyridoxal kinase I (EC 2.7.1.35; EC 2.7.1.49) from Escherichia coli
pdxK / P40191: pyridoxine/pyridoxal/pyridoxamine kinase (EC 2.7.1.35; EC 2.7.1.49) from Escherichia coli

27% id,
92% cov

PS417_12870: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

25% id,
96% cov

PS417_07575: multifunctional fatty acid oxidation complex subunit alpha
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

22% id,
98% cov

PS417_04435: uracil phosphoribosyltransferase
is similar to:
PaperBLAST

UKL1_ARATH / Q9FKS0: Uridine/cytidine kinase UKL1, chloroplastic; AtUK; Uridine kinase-like protein 1; Uridine/cytidine kinase 1; EC 2.7.1.48 from Arabidopsis thaliana
Q9FKS0: uracil phosphoribosyltransferase (EC 2.4.2.9); uridine/cytidine kinase (EC 2.7.1.48) from Arabidopsis thaliana

34% id,
42% cov

UKL2_ARATH / Q9LK34: Uridine/cytidine kinase UKL1, chloroplastic; Uridine kinase-like protein 2; Uridine/cytidine kinase 2; EC 2.7.1.48 from Arabidopsis thaliana

33% id,
42% cov

UKL5_ARATH / Q9LTY6: Uridine kinase-like protein 5; EC 2.7.1.48; EC 2.4.2.9 from Arabidopsis thaliana

32% id,
42% cov

More...

PS417_24605: thiamine-phosphate pyrophosphorylase
is similar to:
PaperBLAST

TPS1L_ARATH / Q5M731: Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic; EC 2.5.1.3; EC 2.7.1.49 from Arabidopsis thaliana
TH1 / Q5M731: 4-amino-2-methyl-5-phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.5.1.3; EC 2.7.4.7) from Arabidopsis thaliana

35% id,
39% cov

TPS1_BRANA / O48881: Thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic; EC 2.5.1.3; EC 2.7.1.49 from Brassica napus
O48881: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Brassica napus

37% id,
36% cov

PS417_21020: phosphoenolpyruvate synthase
is similar to:
PaperBLAST

KPYK_GEOSE / Q02499: Pyruvate kinase; PK; ATP:pyruvate 2-O-phosphotransferase; EC 2.7.1.40 from Geobacillus stearothermophilus
Q02499: pyruvate kinase (EC 2.7.1.40) from Geobacillus stearothermophilus

27% id,
50% cov

P51181: pyruvate kinase (EC 2.7.1.40) from Bacillus licheniformis

35% id,
25% cov

Q6GG09: pyruvate kinase (EC 2.7.1.40) from Staphylococcus aureus

30% id,
23% cov

More...

PS417_03970: 1-phosphofructokinase
is similar to:
PaperBLAST

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

29% id,
35% cov

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

29% id,
34% cov

PS417_23035: PTS mannose transporter subunit IIC
is similar to:
PaperBLAST

KPYK_GEOSE / Q02499: Pyruvate kinase; PK; ATP:pyruvate 2-O-phosphotransferase; EC 2.7.1.40 from Geobacillus stearothermophilus
Q02499: pyruvate kinase (EC 2.7.1.40) from Geobacillus stearothermophilus

21% id,
40% cov

P51182: pyruvate kinase (EC 2.7.1.40) from Sporosarcina psychrophila

34% id,
13% cov

P51181: pyruvate kinase (EC 2.7.1.40) from Bacillus licheniformis

29% id,
14% cov

PS417_26985: phosphoenolpyruvate-protein phosphotransferase
is similar to:
PaperBLAST

A0A1D3TRL9: pyruvate kinase (EC 2.7.1.40) from Anaerobium acetethylicum

26% id,
14% cov

PS417_22995: PTS N-acetyl-D-glucosamine transporter
is similar to:
PaperBLAST

P51181: pyruvate kinase (EC 2.7.1.40) from Bacillus licheniformis

27% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory