Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_27790: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

91% id,
100% cov

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

50% id,
98% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

48% id,
93% cov

More...

PS417_27195: N-acetylglutamate synthase
is similar to:
PaperBLAST

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

31% id,
92% cov

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

30% id,
95% cov

A0A1D6E3W6: acetylglutamate kinase (EC 2.7.2.8) from Zea mays

29% id,
80% cov

More...

PS417_21655: aspartate kinase
is similar to:
PaperBLAST

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

24% id,
96% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

24% id,
89% cov

ARGB_MYCTU / P9WQ01: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Mycobacterium tuberculosis

29% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory