Searching in Pseudomonas simiae WCS417 (WCS417)
Found 6 curated entries in PaperBLAST's database that match '2.8.3.13' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas simiae WCS417, or try another query
| PS417_00585: CoA-transferase is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 91% id, 100% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 86% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 58% id, 95% cov |
| PS417_14920: CoA-transferase is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 36% id, 99% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 36% id, 99% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 33% id, 97% cov |
| PS417_06930: carnitine dehydratase is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 35% id, 99% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 34% id, 99% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 35% id, 96% cov |
| PS417_22865: CoA-transferase is similar to: | PaperBLAST |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 35% id, 99% cov |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 34% id, 99% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 34% id, 99% cov |
| PS417_16430: carnitine dehydratase is similar to: | PaperBLAST |
gcdG / Q88RH1: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas putida | 34% id, 100% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 33% id, 100% cov |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 32% id, 96% cov |
| PS417_22310: CAIB/BAIF family CoA transferase is similar to: | PaperBLAST |
caiB / Q7CXU0: succinate—lglutarate CoA-transferase (EC 2.8.3.13) from Agrobacterium fabrum | 32% id, 51% cov |
AO356_10845: succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) from Pseudomonas fluorescens | 28% id, 57% cov |
SUCHY_HUMAN / Q9HAC7: Succinate--hydroxymethylglutarate CoA-transferase; Dermal papilla-derived protein 13; SuccinylCoA:glutarate-CoA transferase; EC 2.8.3.13 from Homo sapiens | 29% id, 52% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory