Searching in Pseudomonas simiae WCS417 (WCS417)
Found 17 curated entries in PaperBLAST's database that match '3.1.1.25' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas simiae WCS417, or try another query
| PS417_11020: gluconolaconase is similar to: | PaperBLAST |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 77% id, 100% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 34% id, 89% cov |
SMc00883: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Sinorhizobium meliloti | 30% id, 95% cov |
| PS417_07255: calcium-binding protein is similar to: | PaperBLAST |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 34% id, 100% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 37% id, 88% cov |
| PS417_17365: gluconolactonase is similar to: | PaperBLAST |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 35% id, 91% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 32% id, 98% cov |
| PS417_14855: gluconolactonase is similar to: | PaperBLAST |
B2LYJ5: 1,4-lactonase (EC 3.1.1.25) from Fusarium proliferatum | 32% id, 47% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory