Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 138 curated entries in PaperBLAST's database that match '3.1.3.3'.

These curated entries have 107 distinct sequences.

Running ublast with E ≤ 0.01

Found 21 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_21120: phosphoserine phosphatase
is similar to:
PaperBLAST

THRH_PSEAE / Q9I2Y2: Phosphoserine phosphatase ThrH; PSP; PSPase; EC 3.1.3.3 from Pseudomonas aeruginosa

89% id,
100% cov

THRH_PSESM / Q883R9: Phosphoserine phosphatase; PSP; PSPase; EC 3.1.3.3 from Pseudomonas syringae

93% id,
86% cov

PS417_02415: phosphoserine phosphatase
is similar to:
PaperBLAST

SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus

50% id,
96% cov

SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis

46% id,
96% cov

SERB_WOLSU / Q7M7U5: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Wolinella succinogenes

44% id,
98% cov

More...

PS417_27040: 3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

53% id,
65% cov

CA265_RS22635: phosphoserine phosphatase (EC 3.1.3.3) from Pedobacter sp.

32% id,
39% cov

PS417_27600: HAD family hydrolase
is similar to:
PaperBLAST

PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus

40% id,
63% cov

PS417_01690: fructose 1,6-bisphosphatase
is similar to:
PaperBLAST

A8DUA7: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Morus alba

33% id,
75% cov

A8IRK4: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

30% id,
77% cov

P46283: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Arabidopsis thaliana

31% id,
75% cov

More...

PS417_20025: alpha-ribazole phosphatase
is similar to:
PaperBLAST

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

29% id,
73% cov

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

26% id,
77% cov

PS417_26995: phosphoserine phosphatase
is similar to:
PaperBLAST

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

27% id,
78% cov

SERB_ECOLI / P0AGB0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Escherichia coli
SerB / b4388: phosphoserine phosphatase (EC 3.1.3.3) from Escherichia coli
serB: phosphoserine phosphatase; EC 3.1.3.3 from Escherichia coli
serB / P0AGB0: phosphoserine phosphatase (EC 3.1.3.3) from Escherichia coli

23% id,
55% cov

SERB_STRCO / Q9S281: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptomyces coelicolor

26% id,
47% cov

PS417_21475: HAD family hydrolase
is similar to:
PaperBLAST

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

26% id,
81% cov

PS417_09335: HAD family hydrolase
is similar to:
PaperBLAST

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

24% id,
83% cov

SERB2_MYCTU / O53289: Phosphoserine phosphatase SerB2; PSP; PSPase; O-phosphoserine phosphohydrolase; Protein-serine/threonine phosphatase; EC 3.1.3.3; EC 3.1.3.16 from Mycobacterium tuberculosis
O53289: phosphoserine phosphatase (EC 3.1.3.3) from Mycobacterium tuberculosis

26% id,
47% cov

SERB_MYCA1 / A0QJI1: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Mycobacterium avium

25% id,
46% cov

PS417_07720: chemotaxis protein CheY
is similar to:
PaperBLAST

O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

26% id,
66% cov

PS417_15360: histidine kinase
is similar to:
PaperBLAST

O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

26% id,
61% cov

PS417_04730: bifunctional glyoxylate/hydroxypyruvate reductase B
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

30% id,
47% cov

PS417_04530: glycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

31% id,
45% cov

PS417_15020: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

29% id,
47% cov

PS417_14475: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

32% id,
43% cov

PS417_16375: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

29% id,
46% cov

PS417_12455: hydrolase
is similar to:
PaperBLAST

SERB_IDILO / Q5QXU4: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Idiomarina loihiensis

29% id,
44% cov

SERB_METJA / Q58989: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii
Q58989: phosphoserine phosphatase (EC 3.1.3.3) from Methanocaldococcus jannaschii

46% id,
25% cov

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

39% id,
27% cov

More...

PS417_12555: bifunctional glyoxylate/hydroxypyruvate reductase B
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

29% id,
43% cov

PS417_07535: erythronate-4-phosphate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

28% id,
41% cov

PS417_07385: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

21% id,
45% cov

PS417_18545: cell division protein
is similar to:
PaperBLAST

SYNJ1_RAT / Q62910: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Rattus norvegicus

29% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

5839149-5840513 (frame +3) on CP007637
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis
Also see hits to annotated proteins above

52% id,
67% cov

4346756-4347502 (frame -3) on CP007637
is similar to:
PaperBLAST

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana
Also see hits to annotated proteins above

27% id,
82% cov

3923685-3924032 (frame +3) on CP007637
is similar to:
PaperBLAST

INP53_YEAST / Q12271: Polyphosphatidylinositol phosphatase INP53; Suppressor of PMA1 protein 2; Synaptojanin-like protein 3; EC 3.1.3.-; EC 3.1.3.36 from Saccharomyces cerevisiae

30% id,
10% cov

4026795-4027580 (frame -2) on CP007637
is similar to:
PaperBLAST

SYNJ1_RAT / Q62910: Synaptojanin-1; Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1; EC 3.1.3.36 from Rattus norvegicus
Also see hits to annotated proteins above

27% id,
10% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory