Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 257 curated entries in PaperBLAST's database that match '3.2.1.20'.

These curated entries have 183 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_23045: trehalose-6-phosphate hydrolase
is similar to:
PaperBLAST

AAF71997.1: α-glucosidase (EC 3.2.1.20)

59% id,
99% cov

CAA54266.1: α-glucosidase (EC 3.2.1.20)

49% id,
96% cov

AAA25570.1: α-glucosidase (Agl) (EC 3.2.1.20)

46% id,
99% cov

More...

PS417_12800: alpha-amylase
is similar to:
PaperBLAST

Shewana3_2311: Alpha-glucosidase (EC 3.2.1.20) from Shewanella sp.

31% id,
99% cov

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

33% id,
93% cov

BAI67603.1: α-glucosidase (CmmB) (EC 3.2.1.20)

31% id,
97% cov

More...

PS417_23670: muconate cycloisomerase
is similar to:
PaperBLAST

Q2PCE2: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

23% id,
95% cov

PS417_00165: galactonate dehydratase
is similar to:
PaperBLAST

Q2PCE2: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

25% id,
73% cov

PS417_22425: cell envelope biogenesis protein TolA
is similar to:
PaperBLAST

Q5NBP9: mannosyl-oligosaccharide alpha-1,3-glucosidase (EC 3.2.1.207) from Oryza sativa

20% id,
33% cov

PS417_14495: maltooligosyl trehalose synthase
is similar to:
PaperBLAST

MalZ / b0403: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
malZ / P21517: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
P21517: alpha-glucosidase (EC 3.2.1.20) from Escherichia coli

36% id,
18% cov

AIZ92452.1: α-glucosidase Z (EO53_16270;MalZ;b0403) (EC 3.2.1.20)
BAE76183.1: maltodextrin glucosidase (MalZ) (EC 3.2.1.20)

36% id,
18% cov

PS417_14485: malto-oligosyltrehalose trehalohydrolase
is similar to:
PaperBLAST

AAA25570.1: α-glucosidase (Agl) (EC 3.2.1.20)

34% id,
18% cov

ABW98683.1: α-glucosidase / binding-toxin receptor (Agm3;AgAgm3) (EC 3.2.1.20)

27% id,
22% cov

ADB11049.1: α-glucosidase III (EC 3.2.1.20)

28% id,
19% cov

More...

PS417_19850: branched-chain alpha-keto acid dehydrogenase subunit E2
is similar to:
PaperBLAST

Q7PC53: exo-chitinase (non-reducing end) (EC 3.2.1.200) from Saccharophagus degradans

21% id,
22% cov

PS417_15545: glucosidase
is similar to:
PaperBLAST

Q2V621: mannosyl-oligosaccharide glucosidase (EC 3.2.1.106); alpha-glucosidase (EC 3.2.1.20); mannosyl-oligosaccharide alpha-1,3-glucosidase (EC 3.2.1.207) from Candida albicans

22% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory