Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 529 curated entries in PaperBLAST's database that match '3.2.1.21' as complete word(s).

These curated entries have 444 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_06840: beta-D-glucoside glucohydrolase
is similar to:
PaperBLAST

AAL21070.1: β-glucosidase (BglX;STM2166) (EC 3.2.1.21)

64% id,
100% cov

YohA / b2132: β-D-glucoside glucohydrolase, periplasmic (EC 3.2.1.21) from Escherichia coli
bglX / P33363: β-D-glucoside glucohydrolase, periplasmic (EC 3.2.1.21) from Escherichia coli

63% id,
100% cov

AAA60495.1: β-glucosidase (BglX) (EC 3.2.1.21)

63% id,
97% cov

More...

PS417_07620: beta-hexosaminidase
is similar to:
PaperBLAST

AEF56853.1: β-glucosidase A3 (EC 3.2.1.21)

30% id,
45% cov

NAG3_CELFI / Q7WUL3: Beta-N-acetylglucosaminidase/beta-glucosidase; 3-beta-N-acetyl-D-glucosaminidase/beta-D-glucosidase; Nag3; EC 3.2.1.21; EC 3.2.1.52 from Cellulomonas fimi
AAQ05801.1: bifunctional N-acetyl-β-glucosaminidase/β-glucosidase (Nag3) (acts as a phosphorylase in presence of phosphate) (Nag3A) (EC 3.2.1.21|3.2.1.52|2.4.1.-)

26% id,
47% cov

ABL78891.1: β-glucosidase (Bgl;TpBgl;Tpen_1494) (EC 3.2.1.21)
A1S0B1: beta-glucosidase (EC 3.2.1.21) from Thermofilum pendens

28% id,
38% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory