Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 3 curated entries in PaperBLAST's database that match '3.5.1.47' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_19495: N-acyl-L-amino acid amidohydrolase
is similar to:
PaperBLAST

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

31% id,
98% cov

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

33% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory