Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 8 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_21680: succinylglutamate desuccinylase
is similar to:

PfGW456L13_1977: Succinylglutamate desuccinylase (EC from Pseudomonas fluorescens

79% id,
100% cov

O50177: succinylglutamate desuccinylase (EC from Pseudomonas aeruginosa

71% id,
99% cov

BPHYT_RS07720: Succinylglutamate desuccinylase (EC from Burkholderia phytofirmans

42% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory