Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 16 curated entries in PaperBLAST's database that match '3.5.3.6'.

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_22330: arginine deiminase
is similar to:
PaperBLAST

P13981: arginine deiminase (EC 3.5.3.6) from Pseudomonas aeruginosa

82% id,
100% cov

A7LKB0: arginine deiminase (EC 3.5.3.6) from Pseudomonas plecoglossicida

82% id,
100% cov

Q88P52: arginine deiminase (EC 3.5.3.6) from Pseudomonas putida

80% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory