Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 8 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_17860: 2-oxo-hepta-3-ene-1,7-dioate hydratase
is similar to:

praD / C4TP06: 2-oxo-3-hexenedioate decarboxylase (EC from Paenibacillus sp.

41% id,
98% cov

B0VXM8: 2-oxo-3-hexenedioate decarboxylase (EC from Geobacillus stearothermophilus

41% id,
93% cov

xylI / P49155: 4-oxalocrotonate decarboxylase subunit (EC from Pseudomonas putida

36% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory