Curated BLAST
Searching in Pseudomonas simiae WCS417 (WCS417)
Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_07505: cysteine synthase
is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 39% id,
97% cov |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 38% id,
97% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 43% id,
67% cov |
CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus | 43% id,
61% cov |
CBS_APIME / Q2V0C9: Cystathionine beta-synthase; EC 4.2.1.22 from Apis mellifera
Q2V0C9: cystathionine beta-synthase (EC 4.2.1.22) from Apis mellifera | 41% id,
63% cov |
mecA: cystathionine beta-synthase; EC 4.2.1.22 from Emericella nidulans | 43% id,
58% cov |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus
Cbs / P32232: cystathionine β-synthase subunit (EC 4.2.1.22) from Rattus norvegicus | 43% id,
57% cov |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens
CBS / P35520: cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens
P35520: cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens | 42% id,
58% cov |
CBS_YEAST / P32582: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; Sulfur transfer protein 4; EC 4.2.1.22 from Saccharomyces cerevisiae
CYS4 / P32582: Cys4 (EC 4.2.1.22) from Saccharomyces cerevisiae
P32582: cystathionine beta-synthase (EC 4.2.1.22) from Saccharomyces cerevisiae | 37% id,
65% cov |
Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster | 40% id,
60% cov |
CYSO_AERPE / Q9YBL2: Protein CysO; Cystathionine beta-synthase; Cysteine synthase; O-acetylserine sulfhydrylase; O-phosphoserine sulfhydrylase; Serine sulfhydrase; EC 4.2.1.22; EC 2.5.1.47; EC 2.5.1.65 from Aeropyrum pernix | 26% id,
72% cov |
CBS2_CAEEL / Q9N4K2: Putative cystathionine beta-synthase cbs-2; EC 4.2.1.22 from Caenorhabditis elegans | 40% id,
47% cov |
CBS1_CAEEL / G5EFH8: Cystathionine beta-synthase cbs-1; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Caenorhabditis elegans | 38% id,
45% cov |
More... |
PS417_21045: cysteine synthase
is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 37% id,
98% cov |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 34% id,
98% cov |
CBS_APIME / Q2V0C9: Cystathionine beta-synthase; EC 4.2.1.22 from Apis mellifera
Q2V0C9: cystathionine beta-synthase (EC 4.2.1.22) from Apis mellifera | 38% id,
61% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 36% id,
64% cov |
Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster | 37% id,
59% cov |
CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus | 36% id,
59% cov |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens
CBS / P35520: cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens
P35520: cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens | 37% id,
56% cov |
mecA: cystathionine beta-synthase; EC 4.2.1.22 from Emericella nidulans | 35% id,
58% cov |
CBS_YEAST / P32582: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; Sulfur transfer protein 4; EC 4.2.1.22 from Saccharomyces cerevisiae
CYS4 / P32582: Cys4 (EC 4.2.1.22) from Saccharomyces cerevisiae
P32582: cystathionine beta-synthase (EC 4.2.1.22) from Saccharomyces cerevisiae | 32% id,
63% cov |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus
Cbs / P32232: cystathionine β-synthase subunit (EC 4.2.1.22) from Rattus norvegicus | 36% id,
55% cov |
CBS2_CAEEL / Q9N4K2: Putative cystathionine beta-synthase cbs-2; EC 4.2.1.22 from Caenorhabditis elegans | 35% id,
48% cov |
CBS1_CAEEL / G5EFH8: Cystathionine beta-synthase cbs-1; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Caenorhabditis elegans | 32% id,
45% cov |
More... |
PS417_20160: cysteine synthase
is similar to: | PaperBLAST |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 36% id,
100% cov |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 36% id,
98% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 41% id,
65% cov |
CYSO_AERPE / Q9YBL2: Protein CysO; Cystathionine beta-synthase; Cysteine synthase; O-acetylserine sulfhydrylase; O-phosphoserine sulfhydrylase; Serine sulfhydrase; EC 4.2.1.22; EC 2.5.1.47; EC 2.5.1.65 from Aeropyrum pernix | 33% id,
72% cov |
CBS_YEAST / P32582: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; Sulfur transfer protein 4; EC 4.2.1.22 from Saccharomyces cerevisiae
CYS4 / P32582: Cys4 (EC 4.2.1.22) from Saccharomyces cerevisiae
P32582: cystathionine beta-synthase (EC 4.2.1.22) from Saccharomyces cerevisiae | 37% id,
63% cov |
CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus | 39% id,
60% cov |
mecA: cystathionine beta-synthase; EC 4.2.1.22 from Emericella nidulans | 39% id,
59% cov |
CBS_APIME / Q2V0C9: Cystathionine beta-synthase; EC 4.2.1.22 from Apis mellifera
Q2V0C9: cystathionine beta-synthase (EC 4.2.1.22) from Apis mellifera | 37% id,
62% cov |
Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster | 38% id,
60% cov |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus
Cbs / P32232: cystathionine β-synthase subunit (EC 4.2.1.22) from Rattus norvegicus | 38% id,
56% cov |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens
CBS / P35520: cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens
P35520: cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens | 37% id,
57% cov |
CBS2_CAEEL / Q9N4K2: Putative cystathionine beta-synthase cbs-2; EC 4.2.1.22 from Caenorhabditis elegans | 34% id,
48% cov |
CBS1_CAEEL / G5EFH8: Cystathionine beta-synthase cbs-1; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Caenorhabditis elegans | 35% id,
45% cov |
More... |
PS417_12665: hypothetical protein
is similar to: | PaperBLAST |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 28% id,
95% cov |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 31% id,
61% cov |
CBS_APIME / Q2V0C9: Cystathionine beta-synthase; EC 4.2.1.22 from Apis mellifera
Q2V0C9: cystathionine beta-synthase (EC 4.2.1.22) from Apis mellifera | 26% id,
51% cov |
CBS2_CAEEL / Q9N4K2: Putative cystathionine beta-synthase cbs-2; EC 4.2.1.22 from Caenorhabditis elegans | 26% id,
48% cov |
CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus | 27% id,
44% cov |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens
CBS / P35520: cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens
P35520: cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens | 29% id,
40% cov |
CBS_YEAST / P32582: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; Sulfur transfer protein 4; EC 4.2.1.22 from Saccharomyces cerevisiae
CYS4 / P32582: Cys4 (EC 4.2.1.22) from Saccharomyces cerevisiae
P32582: cystathionine beta-synthase (EC 4.2.1.22) from Saccharomyces cerevisiae | 27% id,
42% cov |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus
Cbs / P32232: cystathionine β-synthase subunit (EC 4.2.1.22) from Rattus norvegicus | 27% id,
40% cov |
Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster | 30% id,
35% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory