Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 10 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_17860: 2-oxo-hepta-3-ene-1,7-dioate hydratase
is similar to:

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC from Pseudomonas putida

39% id,
98% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC from Pseudomonas sp.

36% id,
98% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC from Comamonas testosteroni

35% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory