Searching in Pseudomonas simiae WCS417 (WCS417)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas simiae WCS417, or try another query
| PS417_04210: galactarate dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 31% id, 89% cov |
| PS417_00165: galactonate dehydratase is similar to: | PaperBLAST |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 33% id, 64% cov |
RHMD_SALTY / Q8ZNF9: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Salmonella typhimurium | 32% id, 66% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 26% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory