Searching in Pseudomonas simiae WCS417 (WCS417)
Found 7 curated entries in PaperBLAST's database that match '4.3.1.12' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query
| PS417_17585: ornithine cyclodeaminase is similar to: | PaperBLAST |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 62% id, 96% cov |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 57% id, 95% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 57% id, 95% cov |
| PS417_26095: ornithine cyclodeaminase is similar to: | PaperBLAST |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 28% id, 78% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 28% id, 72% cov |
| PS417_10915: ornithine cyclodeaminase is similar to: | PaperBLAST |
OCD_PSEPK / Q88H32: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Pseudomonas putida | 30% id, 65% cov |
OCD_AGRFC / P09773: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium fabrum | 26% id, 68% cov |
OCD_AGRT4 / Q59701: Ornithine cyclodeaminase; OCD; EC 4.3.1.12 from Agrobacterium tumefaciens | 25% id, 68% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory