Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 13 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_14305: hydroxyproline-2-epimerase
is similar to:

PRAC_CLODI / A8DEZ8: Proline racemase; CdPRAC; EC from Clostridioides difficile
Q17ZY4: proline racemase (EC from Clostridioides difficile
A8DEZ8: proline racemase (EC from Clostridioides difficile

35% id,
98% cov

B8LFE4: proline racemase (EC from Trypanosoma vivax

35% id,
96% cov

PRCMB_TRYCC / Q868H8: Proline racemase B; TcPA45-B; TcPRACB; EC from Trypanosoma cruzi
Q868H8: proline racemase (EC from Trypanosoma cruzi

35% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory