Curated BLAST
Searching in Pseudomonas simiae WCS417 (WCS417)
Found 17 curated entries in PaperBLAST's database that match '5.3.1.7'.
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query
PS417_22150: sugar isomerase
is similar to: | PaperBLAST |
PS417_22150: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas simiae | 100% id,
100% cov |
Pf1N1B4_597: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens | 76% id,
97% cov |
AO353_03400: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens | 75% id,
99% cov |
AO356_05200: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens | 74% id,
97% cov |
MANI_PSEC1 / A0A0P9JFY5: D-mannose isomerase; PsMIaseA; EC 5.3.1.7 from Pseudomonas cannabina | 70% id,
97% cov |
MANI_THEFU / A0A077LPS9: D-mannose isomerase; EC 5.3.1.7 from Thermobifida fusca | 50% id,
99% cov |
SquS / b3880: sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli
yihS / P32140: sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli | 47% id,
98% cov |
PGA1_c16670: D-mannose isomerase (EC 5.3.1.7) from Phaeobacter inhibens | 40% id,
93% cov |
Sama_0560: D-mannose isomerase (EC 5.3.1.7) from Shewanella amazonensis | 31% id,
96% cov |
BPHYT_RS02050: D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans | 33% id,
89% cov |
MANI_MARM1 / F2JVT6: D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea | 30% id,
95% cov |
Ac3H11_2078: D-mannose isomerase (EC 5.3.1.7) from Acidovorax sp. | 33% id,
85% cov |
HSERO_RS03650: Mannose isomerase (EC 5.3.1.7) from Herbaspirillum seropedicae | 28% id,
91% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory