Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 9 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_23665: muconolactone delta-isomerase
is similar to:

PS417_23665: Muconolactone isomerase (EC from Pseudomonas simiae

100% id,
100% cov

PfGW456L13_3823: Muconolactone isomerase (EC from Pseudomonas fluorescens

88% id,
100% cov

catC / A0F0B4: muconolactone isomerase (EC from Pseudomonas reinekei

84% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory