Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 50 curated entries in PaperBLAST's database that match '5.4.2.2' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_27785: phosphoglucomutase is similar to:	PaperBLAST
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	78% id, 100% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	45% id, 97% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	36% id, 96% cov
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	32% id, 97% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	28% id, 99% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	24% id, 70% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	25% id, 47% cov
PGM_DROME / Q9VUY9: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Drosophila melanogaster	26% id, 41% cov
PGM1_RAT / P38652: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus	27% id, 35% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	26% id, 35% cov
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	26% id, 35% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	41% id, 8% cov
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PS417_13395: phosphoglucomutase is similar to:	PaperBLAST
pgmA / I6Y2G3: phosphoglucomutase (EC 5.4.2.2) from Mycobacterium tuberculosis I6Y2G3: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Mycobacterium tuberculosis	62% id, 100% cov
A0A0H3NJ17: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica Q8ZQW9: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica	59% id, 100% cov
PGM_ECOLI / P36938: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Escherichia coli Blu / b0688: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli pgm / GB\|ABB65241.1: phosphoglucomutase; EC 5.4.2.2 from Escherichia coli pgm / P36938: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli	59% id, 100% cov
Q4QCF1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Leishmania major	27% id, 93% cov
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	26% id, 96% cov
PGM_DROME / Q9VUY9: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Drosophila melanogaster	25% id, 97% cov
Q670S5: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Trypanosoma cruzi	26% id, 92% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	26% id, 92% cov
PGM1_RAT / P38652: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus	25% id, 96% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	25% id, 93% cov
PGM_EMENI / Q9P931: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Emericella nidulans pgmB: phosphoglucomutase; EC 5.4.2.2 from Emericella nidulans	25% id, 92% cov
A8N8Z1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Coprinopsis cinerea	25% id, 88% cov
PGMP_ARATH / Q9SCY0: Phosphoglucomutase, chloroplastic; PGM; Glucose phosphomutase; Protein REDUCED GRAVITROPIC 2; EC 5.4.2.2 from Arabidopsis thaliana PGM / Q9SCY0: phosphoglucomutase (α-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana Q9SCY0: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	24% id, 78% cov
A0A2H5BEG8: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Ganoderma lucidum	27% id, 71% cov
PGM1_PARTE / P47244: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; Parafusin; Pf; pp63; EC 5.4.2.2 from Paramecium tetraurelia	26% id, 72% cov
P93805: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Zea mays	26% id, 69% cov
Q9SGC1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	27% id, 62% cov
O49299: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	26% id, 61% cov
PGM_SCHPO / O74374: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Schizosaccharomyces pombe	27% id, 45% cov
PGMC1_MAIZE / P93804: Phosphoglucomutase, cytoplasmic 1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Zea mays P93804: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Zea mays	24% id, 38% cov
C6L2E2: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	30% id, 24% cov
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PS417_24005: phosphoglucosamine mutase is similar to:	PaperBLAST
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	33% id, 99% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	30% id, 99% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	28% id, 99% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	28% id, 93% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	26% id, 81% cov
PGM_DROME / Q9VUY9: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Drosophila melanogaster	28% id, 71% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	27% id, 70% cov
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	27% id, 70% cov
PGM1_RAT / P38652: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus	26% id, 71% cov
C6L2F4: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	24% id, 70% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	27% id, 60% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	28% id, 53% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	27% id, 35% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	40% id, 22% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	26% id, 34% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory