Searching in Pseudomonas simiae WCS417 (WCS417)
Found 8 curated entries in PaperBLAST's database that match '5.5.1.1' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas simiae WCS417, or try another query
| PS417_23670: muconate cycloisomerase is similar to: | PaperBLAST |
PS417_23670: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas simiae | 100% id, 100% cov |
Q4K9X1: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas fluorescens | 91% id, 98% cov |
catB / A0F0B3: muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei | 90% id, 98% cov |
| PS417_00165: galactonate dehydratase is similar to: | PaperBLAST |
Q4K9X1: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas fluorescens | 27% id, 91% cov |
catB / A0F0B3: muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei | 27% id, 86% cov |
C6YXG6: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei | 26% id, 88% cov |
| PS417_13320: L-alanine-DL-glutamate epimerase is similar to: | PaperBLAST |
Q4K9X1: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas fluorescens | 24% id, 92% cov |
catB / A0F0B3: muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei | 24% id, 92% cov |
PS417_23670: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas simiae | 23% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory