Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas simiae WCS417 (WCS417)

Found 193 curated entries in PaperBLAST's database that match '6.2.1.1'.

These curated entries have 146 distinct sequences.

Running ublast with E ≤ 0.01

Found 24 relevant proteins in Pseudomonas simiae WCS417, or try another query

PS417_21750: acetyl-CoA synthetase
is similar to:
PaperBLAST

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

96% id,
100% cov

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

96% id,
100% cov

ACSA_ECOLI / P27550: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Escherichia coli
AcsA / b4069: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.1; EC 6.2.1.17) from Escherichia coli
acs / P27550: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.17; EC 6.2.1.1) from Escherichia coli

69% id,
99% cov

More...

PS417_23925: acetyl-CoA synthetase
is similar to:
PaperBLAST

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

62% id,
100% cov

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

61% id,
100% cov

ACSA_SALTY / Q8ZKF6: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Salmonella typhimurium

61% id,
96% cov

More...

PS417_12145: acetoacetyl-CoA synthetase
is similar to:
PaperBLAST

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti

54% id,
99% cov

aacS / D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans
D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

43% id,
97% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

42% id,
97% cov

More...

PS417_17010: AMP-binding protein
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

54% id,
98% cov

F1CYZ6: 4-coumarate-CoA ligase (EC 6.2.1.12) from Acetobacterium woodii

32% id,
96% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

30% id,
96% cov

More...

PS417_10895: AMP-dependent synthetase
is similar to:
PaperBLAST

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

41% id,
94% cov

ACSM3_MOUSE / Q3UNX5: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Mus musculus

39% id,
93% cov

ACSM3_HUMAN / Q53FZ2: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Homo sapiens

39% id,
92% cov

More...

PS417_18255: AMP-binding protein
is similar to:
PaperBLAST

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis

38% id,
95% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

33% id,
89% cov

ACSM3_MOUSE / Q3UNX5: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Mus musculus

34% id,
85% cov

More...

PS417_19290: long-chain acyl-CoA synthetase
is similar to:
PaperBLAST

S27A6_MOUSE / E9Q9W4: Long-chain fatty acid transport protein 6; FATP-6; Fatty acid transport protein 6; Arachidonate--CoA ligase; Fatty-acid-coenzyme A ligase, very long-chain 2; Long-chain-fatty-acid--CoA ligase; Solute carrier family 27 member 6; Very long-chain acyl-CoA synthetase homolog 1; VLACS2; VLCSH1; mVLCS-H1; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.- from Mus musculus

40% id,
90% cov

S27A2_MOUSE / O35488: Long-chain fatty acid transport protein 2; Arachidonate--CoA ligase; Fatty acid transport protein 2; FATP-2; Fatty-acid-coenzyme A ligase, very long-chain 1; Long-chain-fatty-acid--CoA ligase; Phytanate--CoA ligase; Solute carrier family 27 member 2; Slc27a2; THCA-CoA ligase; Very long-chain acyl-CoA synthetase; VLACS; VLCS; Very long-chain-fatty-acid-CoA ligase; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.24; EC 6.2.1.7; EC 6.2.1.- from Mus musculus

37% id,
95% cov

S27A2_RAT / P97524: Long-chain fatty acid transport protein 2; Arachidonate--CoA ligase; Fatty acid transport protein 2; FATP-2; Fatty-acid-coenzyme A ligase, very long-chain 1; Long-chain-fatty-acid--CoA ligase; Phytanate--CoA ligase; Solute carrier family 27 member 2; THCA-CoA ligase; Very long-chain acyl-CoA synthetase; VLACS; VLCS; Very long-chain-fatty-acid-CoA ligase; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.24; EC 6.2.1.7; EC 6.2.1.- from Rattus norvegicus

39% id,
89% cov

More...

PS417_10690: acyl-CoA synthetase
is similar to:
PaperBLAST

ACDB2_PYRFU / Q8TZY8: Acetate--CoA ligase [ADP-forming] II subunit beta; ADP-forming acetyl coenzyme A synthetase II subunit beta; ACS II subunit beta; EC 6.2.1.13 from Pyrococcus furiosus

32% id,
99% cov

Q5JIA9: acetate-CoA ligase (ADP-forming) (subunit 1/2) (EC 6.2.1.13) from Thermococcus kodakarensis

34% id,
88% cov

pauA / Q9ZER2: pimeloyl-CoA synthetase monomer (EC 6.2.1.14) from Pseudomonas mendocina

30% id,
97% cov

More...

PS417_22070: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

33% id,
93% cov

P41636: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus taeda

31% id,
96% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

28% id,
96% cov

More...

PS417_22065: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

4CLL1_ARATH / Q9LQ12: 4-coumarate--CoA ligase-like 1; 4-coumarate--CoA ligase isoform 10; At4CL10; EC 6.2.1.12 from Arabidopsis thaliana

30% id,
98% cov

U3MJP5: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pueraria montana

31% id,
96% cov

A0A0D4C3L0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Plagiochasma appendiculatum

32% id,
92% cov

More...

PS417_08915: succinyl-CoA synthetase subunit alpha
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

33% id,
88% cov

PS417_15170: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

4CLL1_ARATH / Q9LQ12: 4-coumarate--CoA ligase-like 1; 4-coumarate--CoA ligase isoform 10; At4CL10; EC 6.2.1.12 from Arabidopsis thaliana

30% id,
98% cov

4CL3_ORYSJ / Q6ETN3: 4-coumarate--CoA ligase 3; 4CL 3; Os4CL3; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 3; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q6ETN3: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

30% id,
96% cov

Q6PQ01: 4-coumarate-CoA ligase (EC 6.2.1.12) from Agastache rugosa

29% id,
96% cov

More...

PS417_04540: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

CCL3_HUMLU / M4IS88: Acetate--CoA ligase CCL3; HlCCL3; 2-methylbutanoate--CoA ligase CCL4; 2-methylpropanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Hexanoate--CoA ligase CCL3; Isovalerate--CoA ligase CCL3; Pentanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.1; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus

31% id,
95% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

30% id,
94% cov

CCL4_HUMLU / M4IQQ5: 2-methylpropanoate--CoA ligase CCL4; HlCCL4; 2-methylbutanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus
CCL4 / M4IQQ5: isobutanoate/2-methylbutanoate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

28% id,
96% cov

More...

PS417_08910: succinyl-CoA synthetase subunit beta
is similar to:
PaperBLAST

ccsA / Q75VW8: citryl-CoA synthetase large subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW8: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

32% id,
88% cov

ACD_METJA / Q58010: Acetate--CoA ligase [ADP-forming]; ADP-forming acetyl coenzyme A synthetase; ACS; EC 6.2.1.13 from Methanocaldococcus jannaschii

26% id,
31% cov

PS417_13215: Triostin synthetase I
is similar to:
PaperBLAST

B8QN50: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus radiata

28% id,
95% cov

P41636: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus taeda

28% id,
95% cov

CCL4_HUMLU / M4IQQ5: 2-methylpropanoate--CoA ligase CCL4; HlCCL4; 2-methylbutanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus
CCL4 / M4IQQ5: isobutanoate/2-methylbutanoate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

27% id,
95% cov

More...

PS417_19545: peptide synthase
is similar to:
PaperBLAST

4CL1_ORYSJ / P17814: 4-coumarate--CoA ligase 1; 4CL 1; Os4CL1; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 1; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
P17814: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

29% id,
91% cov

4CL2 / P14913: 4-coumarate--CoA ligase 1 (EC 6.2.1.12) from Petroselinum crispum
P14913: 4-coumarate-CoA ligase (EC 6.2.1.12) from Petroselinum crispum

28% id,
90% cov

A0A1L7H9K1: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

28% id,
91% cov

More...

PS417_13265: peptide synthetase
is similar to:
PaperBLAST

4CL5_ORYSJ / Q6ZAC1: 4-coumarate--CoA ligase 5; 4CL 5; Os4CL5; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 5; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q6ZAC1: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

25% id,
99% cov

4CL1_ORYSJ / P17814: 4-coumarate--CoA ligase 1; 4CL 1; Os4CL1; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 1; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
P17814: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

24% id,
97% cov

B8QN50: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus radiata

23% id,
99% cov

More...

PS417_11690: peptide synthase
is similar to:
PaperBLAST

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

25% id,
100% cov

B8QN50: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus radiata

25% id,
97% cov

P41636: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pinus taeda

25% id,
97% cov

More...

PS417_11695: peptide synthase
is similar to:
PaperBLAST

4CL1_ORYSJ / P17814: 4-coumarate--CoA ligase 1; 4CL 1; Os4CL1; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 1; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
P17814: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

24% id,
100% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

24% id,
95% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

24% id,
95% cov

More...

PS417_13260: pyochelin synthetase
is similar to:
PaperBLAST

4CL2_ARATH / Q9S725: 4-coumarate--CoA ligase 2; 4CL 2; 4-coumarate--CoA ligase isoform 2; At4CL2; 4-coumaroyl-CoA synthase 2; Caffeate--CoA ligase; EC 6.2.1.12; EC 6.2.1.- from Arabidopsis thaliana
4CL2 / Q9S725: 4-coumarate coenzyme A ligase 2 (EC 6.2.1.12) from Arabidopsis thaliana
Q9S725: 4-coumarate-CoA ligase (EC 6.2.1.12) from Arabidopsis thaliana

25% id,
93% cov

4CL1 / A0A4Y5UJ50: 4-coumarate:CoA ligase (EC 6.2.1.12; EC 6.2.1.34) from Avena sativa

24% id,
92% cov

D5LLN7: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

25% id,
85% cov

More...

PS417_09015: AMP-binding protein
is similar to:
PaperBLAST

4CL5_ORYSJ / Q6ZAC1: 4-coumarate--CoA ligase 5; 4CL 5; Os4CL5; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 5; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q6ZAC1: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

28% id,
82% cov

4CL1 / A0A4Y5UJ50: 4-coumarate:CoA ligase (EC 6.2.1.12; EC 6.2.1.34) from Avena sativa

27% id,
85% cov

ACSL5_HUMAN / Q9ULC5: Long-chain-fatty-acid--CoA ligase 5; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 5; LACS 5; EC 6.2.1.3; EC 6.2.1.15 from Homo sapiens

29% id,
79% cov

More...

PS417_00605: peptide transporter
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

26% id,
89% cov

D5LNB6: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

28% id,
60% cov

S27A3_HUMAN / Q5K4L6: Long-chain fatty acid transport protein 3; FATP-3; Fatty acid transport protein 3; Arachidonate--CoA ligase; Long-chain-fatty-acid--CoA ligase; Solute carrier family 27 member 3; Very long-chain acyl-CoA synthetase homolog 3; VLCS-3; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.- from Homo sapiens

24% id,
63% cov

More...

PS417_13615: long-chain acyl-CoA synthetase
is similar to:
PaperBLAST

T1NXG6: 4-coumarate-CoA ligase (EC 6.2.1.12) from Ocimum tenuiflorum

28% id,
51% cov

S4WX39: 4-coumarate-CoA ligase (EC 6.2.1.12) from Ocimum basilicum

28% id,
51% cov

ACSL1_RAT / P18163: Long-chain-fatty-acid--CoA ligase 1; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain-fatty-acid--CoA ligase, liver isozyme; Phytanate--CoA ligase; EC 6.2.1.3; EC 6.2.1.15; EC 6.2.1.24 from Rattus norvegicus

30% id,
39% cov

More...

PS417_02095: AMP-binding protein
is similar to:
PaperBLAST

facA: acetyl-coenzyme A synthetase; EC 6.2.1.1 from Emericella nidulans

25% id,
37% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

25% id,
22% cov

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

25% id,
22% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3977622-3979328 (frame +3) on CP007637
is similar to:
PaperBLAST

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis
Also see hits to annotated proteins above

38% id,
98% cov

ACSM3_MOUSE / Q3UNX5: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Mus musculus
Also see hits to annotated proteins above

32% id,
96% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana
Also see hits to annotated proteins above

24% id,
94% cov

1941562-1942530 (frame +1) on CP007637
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus
Also see hits to annotated proteins above

33% id,
90% cov

4239507-4252997 (frame -2) on CP007637
is similar to:
PaperBLAST

B3TJI5: 4-coumarate-CoA ligase (EC 6.2.1.12) from Ruta graveolens
Also see hits to annotated proteins above

27% id,
98% cov

4CL1 / A0A4Y5UJ50: 4-coumarate:CoA ligase (EC 6.2.1.12; EC 6.2.1.34) from Avena sativa
Also see hits to annotated proteins above

27% id,
94% cov

LE4CL-1 / Q42879: 4-coumarate coenzyme A ligase (EC 6.2.1.12) from Lithospermum erythrorhizon
Also see hits to annotated proteins above

26% id,
83% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory